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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CD81, CD81 molecule
Sequence ID:NM_004356
RefSeqGene ID:NG_023386
Entrez Gene ID:975
Ensembl ID:ENSG00000110651

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 2412612 - 2418626

NM_004356 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
129923985462398844
30041424116412411755
41551224153242415421
51358724162012416275
58869224166452416749
69379424170982417199
79588124178572417943
882149724180332418648

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3510634Full LengthBC002978CD81 molecule
30398483Full LengthBC093047CD81 molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004347  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004356 NP_004347 P60033 Tetraspannin

Related Sequences

 
mRNAGenPeptSwissProt
M33680 AAA36663 P60033
BC002978 AAH02978 P60033
BC093047 AAH93047 P60033
BT019507 AAV38314 P60033
BT019508 AAV38315 P60033
DQ891836 ABM82762  
DQ891849 ABM82775  
DQ895022 ABM85948  
AB209380 BAD92617 Q59FS9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CD81 NP_004347 R.norvegicus Cd81 25621   NP_037219 93
M.musculus Cd81 12520 Gene Info NP_598416 92
A.gambiae AgaP_AGAP000823 1277333   XP_316787 35
D.melanogaster Tsp96F 43127   NP_524500 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)