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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLEC10A, C-type lectin domain family 10, member A
Sequence ID:NM_182906
NM_006344
RefSeqGene ID:NG_029878
Entrez Gene ID:10462
Ensembl ID:ENSG00000132514

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 6978400 - 6983563

 Exon Info From UCSC:
NM_182906
NM_006344

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5225381Full LengthBC027858C-type lectin domain family 10, member A
5751735Full LengthBC039011C-type lectin domain family 10, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_878910  NP_006335  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006344 NP_006335   Lectin_C
Lectin_N
NM_182906 NP_878910 Q8IUN9 Lectin_C
Lectin_N

Related Sequences

 
mRNAGenPeptSwissProt
BC027858 AAH27858 Q8IUN9
BC039011 AAH39011 Q8IUN9
D50532 BAA09101 Q8IUN9
AK291975 BAF84664 A8K7G0
AK292363 BAF85052 Q8IUN9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLEC10A NP_878910 R.norvegicus Clec10a 64195   NP_071788 57
M.musculus Mgl2 216864 Gene Info NP_660119 56
M.musculus Clec10a 17312 Gene Info NP_034926 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)