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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EPCAM, epithelial cell adhesion molecule
Sequence ID:NM_002354
RefSeqGene ID:NG_012352
Entrez Gene ID:4072
Ensembl ID:ENSG00000119888

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
COLORECTAL CANCER, HEREDITARY NONPOLYPOSIS, TYPE 8 
DIARRHEA 5, WITH TUFTING ENTEROPATHY, CONGENITAL 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 47596449 - 47614161

NM_002354 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14344759628647596719
4355424760060147600708
5437834760094647601186
7848494760237247602437
8509134760415247604215
91410154760609147606192
101612164760690747607107
121712614761230447612348
126217164761371047614164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3861826Full LengthBC014785epithelial cell adhesion molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002345  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002354 NP_002345 P16422 Thyroglobulin_1

Related Sequences

 
mRNAGenPeptSwissProt
M32306 AAA35723 P16422
M33011 AAA35861 P16422
M32325 AAA36151 P16422
M26481 AAA59543 P16422
BC014785 AAH14785 P16422
DQ891338 ABM82264  
DQ894520 ABM85446  
X14758 CAA32870 P16422
CR542259 CAG47055 P16422
CR542283 CAG47078 P16422

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EPCAM NP_002345 R.norvegicus Epcam 171577   NP_612550 82
M.musculus Epcam 17075 Gene Info NP_032558 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)