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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRTAP5-4, keratin associated protein 5-4
Sequence ID:NM_001012709
Entrez Gene ID:387267
Ensembl ID:ENSG00000241598

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 1642187 - 1643368

NM_001012709 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12516421871642211
2673016422141642918
911135916429191643367

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014809Full LengthBC146561keratin associated protein 5-4
100015265BC148329keratin associated protein 5-4

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012709 NP_001012727 Q6L8H1  

Related Sequences

 
mRNAGenPeptSwissProt
BC146561 AAI46562 Q6L8H1
BC148329 AAI48330  
AB126073 BAD20200 Q6L8H1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRTAP5-4 NP_001012727 M.musculus Krtap5-2 71623 Gene Info NP_082120 90
M.musculus Gm10153 100039757   XP_001473498 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)