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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AGAP6, ArfGAP with GTPase domain, ankyrin repeat and PH domain 6
Sequence ID:NM_001077665
Entrez Gene ID:414189
Ensembl ID:ENSG00000204149

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 51748403 - 51770185

NM_001077665 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16215174807751748697
6226905174906751749135
6917595175143551751503
7607945175415451754188
7958955176175551761855
8969315176444451764479
9329835176778451767835
98427715176847051770257

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077665 NP_001071133    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGAP6 NP_001071133 H.sapiens AGAP8 728404 Gene Info NP_001071154 98
H.sapiens AGAP4 119016 Gene Info NP_597703 98
H.sapiens AGAP7 653268 Gene Info NP_001071153 97
H.sapiens AGAP10 728127   XP_001714838 96
H.sapiens AGAP9 642517 Gene Info NP_001177739 96
H.sapiens AGAP5 729092 Gene Info NP_001137472 96
H.sapiens AGAP11 119385 Gene Info NP_597704 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)