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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDGFA, platelet-derived growth factor alpha polypeptide
Sequence ID:NM_002607
NM_033023
RefSeqGene ID:NG_029727
Entrez Gene ID:5154
Ensembl ID:ENSG00000197461

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 540752 - 558638

 Exon Info From UCSC:
NM_002607
NM_033023

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014818Full LengthBC146594platelet-derived growth factor alpha polypeptide
100014519BC141593platelet-derived growth factor alpha polypeptide

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002607 NP_002598 P04085  
NM_033023 NP_148983    

Related Sequences

 
mRNAGenPeptSwissProt
BC109246 AAI09247 Q32M96
BC141593 AAI41594  
BC146594 AAI46595  
AK292217 BAF84906 A8K852
AB451309 BAG70123 P04085
AB451439 BAG70253 P04085
A09204 CAA00830  
X03795 CAA27421 P04085
X06374 CAA29677 P04085

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDGFA NP_148983 M.musculus Pdgfa 18590 Gene Info NP_032834 92
R.norvegicus Pdgfa 25266   NP_036933 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta