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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRAK1, trafficking protein, kinesin binding 1
Sequence ID:NM_001042646
NM_001265608
NM_001265609
NM_001265610
NM_014965
Entrez Gene ID:22906
Ensembl ID:ENSG00000182606

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 42132745 - 42267260

 Exon Info From UCSC:
NM_001042646
NM_014965

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4562916Full LengthBC015922trafficking protein, kinesin binding 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042646 NP_001036111 Q9UPV9  
NM_001265608 NP_001252537    
NM_001265609 NP_001252538    
NM_001265610 NP_001252539    
NM_014965 NP_055780    

Related Sequences

 
mRNAGenPeptSwissProt
BC015922 AAH15922 Q9UPV9
EU446989 ABZ92518  
AB028965 BAA82994 Q9UPV9
AK294221 BAH11704 B7Z218
AK295480 BAH12083 B7Z347
AK295848 BAH12201 B7Z3G5
AK316260 BAH14631 B7ZAE5
BX647199 CAH56169 Q9UPV9
AL713787 CAH56394 Q659B5
AM392573 CAL37451  
AM393596 CAL38473  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRAK1 NP_001036111 M.musculus Trak1 67095 Gene Info NP_780323 95
R.norvegicus Trak1 316085   NP_001128037 95
A.gambiae AgaP_AGAP008801 1275657   XP_314926 39
D.melanogaster milt 45683   NP_723249 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)