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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYCE3, Synaptonemal complex central element protein 3
Sequence ID:NM_001123225
Entrez Gene ID:644186
Ensembl ID:ENSG00000217442

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 50989625 - 50994861

NM_001123225 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22915098954150989830
2924005099472550994833
4014425100128651001327

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40134492Full LengthBC127859chromosome 22 open reading frame 41
40134499Full LengthBC127860chromosome 22 open reading frame 41

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001123225 NP_001116697 A1L190  

Related Sequences

 
mRNAGenPeptSwissProt
BC127859 AAI27860 A1L190
BC127860 AAI27861 A1L190
EU082028 ABU52998 A1L190

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYCE3 NP_001116697 M.musculus Syce3 75459 Gene Info NP_001156352 91
R.norvegicus Syce3 689933   NP_001128725 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)