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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ARID5B, AT rich interactive domain 5B (MRF1-like)
Sequence ID:NM_001244638
NM_032199
RefSeqGene ID:NG_030027
Entrez Gene ID:84159
Ensembl ID:ENSG00000150347

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 63809224 - 63845619

Transcript StartTranscript EndChromosomal Start Chromosomal End
14776366101263661488
4787326366191763662171
7339586369994163700166
95911896375984963760079
119013026381064663810758
130315046381687563817076
150515576381900163819053
155816556382945863829555
165618546384546063845658
185579416385062063856706

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062041Full LengthBC156570AT rich interactive domain 5B (MRF1-like)
3681098IncompleteBC015120AT rich interactive domain 5B (MRF1-like)
4105813IncompleteBC107800AT rich interactive domain 5B (MRF1-like)
4248986IncompleteBC056680AT rich interactive domain 5B (MRF1-like)
5529276IncompleteBC036831AT rich interactive domain 5B (MRF1-like)
30345306IncompleteBC066345AT rich interactive domain 5B (MRF1-like)
100016022BC152736AT rich interactive domain 5B (MRF1-like)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001244638 NP_001231567    
NM_032199 NP_115575 Q14865  

Related Sequences

 
mRNAGenPeptSwissProt
M73837 AAA59870 Q14865
BC015120 AAH15120 Q14865
BC036831 AAH36831 Q14865
BC066345 AAH66345 Q14865
BC107800 AAI07801 Q14865
BC152736 AAI52737 Q14865
BC156570 AAI56571  
AK024803 BAB15012 Q14865
AK296921 BAG59475 Q14865
BX537690 CAD97814 Q14865
BX641020 CAE46013 Q14865

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARID5B NP_115575 M.musculus Arid5b 71371 Gene Info NP_076087 88
R.norvegicus Arid5b 309728   NP_001101094 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)