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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ARHGEF39, Rho guanine nucleotide exchange factor (GEF) 39
Sequence ID:NM_032818
Entrez Gene ID:84904
Ensembl ID:ENSG00000137135

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 35659340 - 35662987

NM_032818 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126593565934035661998
266027483566217535662263
274929783566250835662737
297931073566294235663070
310831783566331835663388
317932973566400435664122
329834183566436835664488
341935133566475235664846
351437633566502835665277

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5000577Full LengthBC033666chromosome 9 open reading frame 100

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032818 NP_116207 Q8N4T4  

Related Sequences

 
mRNAGenPeptSwissProt
BC033666 AAH33666 Q8N4T4
AY390225 AAR01010 Q8N4T4
AY390226 AAR01011 Q8N4T4
AK027548 BAB55192 Q8N4T4
AK303513 BAG64543 B4E0T1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C9orf100 NP_116207 R.norvegicus RGD1310376 298404   NP_001100146 89
M.musculus E130306D19Rik 230098 Gene Info NP_001013395 87
A.gambiae AgaP_AGAP011707 3291410   XP_552548 26
D.melanogaster RhoGEF4 38806   NP_648101 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)