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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIGD2A, HIG1 hypoxia inducible domain family, member 2A
Sequence ID:NM_138820
Entrez Gene ID:192286
Ensembl ID:ENSG00000146066

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 175815783 - 175816751

NM_138820 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1191175815783175815973
192610175816331175816749

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2959830Full LengthBC007502HIG1 domain family, member 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620175  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138820 NP_620175 Q9BW72 HIG_1_N

Related Sequences

 
mRNAGenPeptSwissProt
BC007502 AAH07502 Q9BW72
DQ891893 ABM82819  
DQ895080 ABM86006  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIGD2A NP_620175 M.musculus Higd2a 67044 Gene Info NP_080209 84
R.norvegicus Higd2a 290999   NP_001099572 83
R.norvegicus Higd2al1 688606   XP_001067593 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)