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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PSENEN, presenilin enhancer 2 homolog (C. elegans)
Sequence ID:NM_172341
RefSeqGene ID:NG_027934
Entrez Gene ID:55851
Ensembl ID:ENSG00000205155

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 36236501 - 36237903

NM_172341 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11083623649336236600
1092653623673536236891
2663703623731936237423
3716653623760836237902

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4096271Full LengthBC009575presenilin enhancer 2 homolog (C. elegans)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172341 NP_758844 Q9NZ42  

Related Sequences

 
mRNAGenPeptSwissProt
AF220053 AAF67646 Q9NZ42
BC009575 AAH09575 Q9NZ42
DQ893095 ABM84021  
DQ896368 ABM87367  
AK312233 BAG35166 Q9NZ42

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSENEN NP_758844 M.musculus Psenen 66340 Gene Info NP_079774 96
R.norvegicus Psenen 292788   NP_001008764 96
D.melanogaster pen-2 251430   NP_788401 61
A.gambiae AgaP_AGAP008094 1277857   XP_317362 55
C.elegans pen-2 176565   NP_499459 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)