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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLDN10, claudin 10
Sequence ID:NM_001160100
NM_006984
NM_182848
Entrez Gene ID:9071
Ensembl ID:ENSG00000134873

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q31-q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 96229523 - 96255218

 Exon Info From UCSC:
NM_001160100
NM_006984
NM_182848

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4246806Full LengthBC010920claudin 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008915  NP_878268  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001160100 NP_001153572    
NM_006984 NP_008915 Q6IBF9
P78369
PMP22_Claudin
NM_182848 NP_878268   PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
U89916 AAC79506 Q6IBF9
P78369
BC010920 AAH10920 Q6IBF9
P78369
DQ892831 ABM83757  
DQ896077 ABM87076  
AK055855 BAB71030 P78369
AK315737 BAG38092 Q6IBF9
CR456845 CAG33126 Q6IBF9
P78369

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLDN10 NP_008915 R.norvegicus Cldn10 290485   NP_001099528 96
M.musculus Cldn10 58187 Gene Info NP_067361 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)