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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VAMP5, Vesicle-associated membrane protein 5
Sequence ID:NM_006634
Entrez Gene ID:10791
Ensembl ID:ENSG00000168899

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 85811556 - 85820492

NM_006634 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1868581153085811615
872248581884785818984
2256658582007085820510

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4617039Full LengthBC017891vesicle-associated membrane protein 5 (myobrevin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006625  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006634 NP_006625 O95183
Q6FG93
Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
AF054825 AAC97473 O95183
Q6FG93
AF077197 AAD26992 O95183
Q6FG93
AF151025 AAF36111 O95183
BC017891 AAH17891 O95183
Q6FG93
DQ891972 ABM82898  
DQ895162 ABM86088  
AK292660 BAF85349 Q6FG93
CR542215 CAG47011 O95183
Q6FG93

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VAMP5 NP_006625 M.musculus Vamp5 53620 Gene Info NP_001074211 74
R.norvegicus Vamp5 89818   NP_446007 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)