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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPS7, ribosomal protein S7
Sequence ID:NM_001011
RefSeqGene ID:NG_011744
Entrez Gene ID:6201
Ensembl ID:ENSG00000171863

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
DIAMOND-BLACKFAN ANEMIA 8 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 3622914 - 3628472

NM_001011 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18836228523622939
8918136231813623273
18225336234063623477
25439736240763624219
39846236252993625363
46361336276993627849
61472736283943628507

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3940495Full LengthBC002866ribosomal protein S7
4442840Full LengthBC061901ribosomal protein S7
5811776Full LengthBC071919ribosomal protein S7

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001011 NP_001002 P62081 Ribosomal_S7e

Related Sequences

 
mRNAGenPeptSwissProt
M77233 AAB00969 P62081
BC002866 AAH02866 P62081
BC061901 AAH61901 P62081
BC071919 AAH71919 P62081
DQ892985 ABM83911  
DQ896234 ABM87233  
AB209386 BAD92623 Q59FS3
AK311794 BAG34737 P62081

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPS7 NP_001002 M.musculus Rps7 20115 Gene Info NP_035430 100
R.norvegicus Rps7 29258   NP_113758 100
R.norvegicus LOC100362830 100362830   XP_002729622 100
A.thaliana AT5G16130 831470   NP_197117 54
A.thaliana AT3G02560 821308   NP_186905 54
S.cerevisiae RPS7B 855628   NP_014303 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)