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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PRIM1, primase, DNA, polypeptide 1 (49kDa)
Sequence ID:NM_000946
Entrez Gene ID:5557
Ensembl ID:ENSG00000198056

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57125405 - 57146107

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3686937Full LengthBC005266primase, DNA, polypeptide 1 (49kDa)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000937  

Protein Infomation

NM_000946 NP_000937 P49642 DNA_primase_S

Related Sequences

BC005266 AAH05266 P49642
EU176762 ABW03563  
EU176421 ABW03872  
AK223391 BAD97111 Q53F98
AK314866 BAG37381 B2RBY4
X74330 CAA52377 P49642

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PRIM1 NP_000937 M.musculus Prim1 19075 Gene Info NP_032947 91
A.gambiae AgaP_AGAP006065 1276738   XP_316116 46
A.thaliana POLA3 834193   NP_199003 46
D.melanogaster DNApol-alpha50 38942   NP_523972 44
N.crassa NCU02232 3875792   XP_959645 43
C.elegans T24C4.5 188846   NP_497283 42
S.pombe spp1 2543323   NP_593765 42
C.elegans pri-1 176358   NP_499126 41
P.falciparum PF14_0366 811948   XP_001348540 41
S.cerevisiae PRI1 854825   NP_012273 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)