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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MT1E, Metallothionein 1E
Sequence ID:NM_175617
Entrez Gene ID:4493
Ensembl ID:ENSG00000169715

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thyroid, uncharacterized tissue, uterus, vascular
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 56659386 - 56661024

NM_175617 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12075665958456659790
2082735666037756660442
2745045666079156661021

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3892441Full LengthBC009699metallothionein 1E
6560167Full LengthBC062734metallothionein 1E
40115058Full LengthBC131609metallothionein 1E

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_783316  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175617 NP_783316 P04732 Metallothio

Related Sequences

 
mRNAGenPeptSwissProt
S68949 AAB30082 P04732
BC009699 AAH09699 P04732
BC062734 AAH62734 P04732
BC131609 AAI31610 P04732
AF495759 AAM15968 P04732
HQ448741 ADQ33219  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MT1E NP_783316 R.norvegicus Mt1a 24567   NP_620181 87
M.musculus Mt1 17748 Gene Info NP_038630 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)