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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. EIF5A, eukaryotic translation initiation factor 5A
Sequence ID:NM_001143760
Entrez Gene ID:1984
Ensembl ID:ENSG00000132507

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13-p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 7213003 - 7215278

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961296Full LengthBC000751eukaryotic translation initiation factor 5A
2961296Full LengthBC001832eukaryotic translation initiation factor 5A
5022012Full LengthBC030160eukaryotic translation initiation factor 5A
6495558Full LengthBC107779eukaryotic translation initiation factor 5A
6528111Full LengthBC080196eukaryotic translation initiation factor 5A
6575132Full LengthBC085015eukaryotic translation initiation factor 5A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001961  

Protein Infomation

NM_001143760 NP_001137232    
NM_001143761 NP_001137233    
NM_001143762 NP_001137234    
NM_001970 NP_001961 P63241 eIF-5a

Related Sequences

M23419 AAA58453 P63241
BC000751 AAH00751 P63241
BC001832 AAH01832 P63241
BC030160 AAH30160 P63241
BC080196 AAH80196 P63241
BC085015 AAH85015 P63241
BC107779 AAI07780 P63241
AF376057 AAL40917 Q8WXQ9
AY129319 AAN17514 P63241
AY129320 AAN17515 P63241
AY129321 AAN17516 P63241
AY129322 AAN17517 Q8WXQ9
AY129322 AAN17518 P63241
DQ892273 ABM83199  
DQ895474 ABM86400  
AK292615 BAF85304 P63241

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens EIF5A NP_001137232 A.gambiae AgaP_AGAP011284 1270647   XP_564212 70
D.melanogaster eIF-5A 37846   NP_726411 69
C.elegans iff-2 174367   NP_495807 63
A.thaliana ELF5A-1 837955   NP_172848 58
P.falciparum PFL0210c 811095   XP_001350451 57
A.thaliana ELF5A-3 843273   NP_177100 55
C.elegans iff-1 176373   NP_499152 55
A.thaliana FBR12 839203   NP_173985 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)