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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APOF, apolipoprotein F
Sequence ID:NM_001638
Entrez Gene ID:319
Ensembl ID:ENSG00000175336

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 56755008 - 56756574

NM_001638 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3216505675435456755972
165117205675651356756582

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4710467Full LengthBC026257apolipoprotein F

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001638 NP_001629 Q13790  

Related Sequences

 
mRNAGenPeptSwissProt
L27050 AAA65642 Q13790
BC026257 AAH26257 Q13790
HQ447649 ADQ32134  
AK314892 BAG37406 B2RC09

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APOF NP_001629 R.norvegicus Apof 500761   NP_001019522 67
M.musculus Apof 103161 Gene Info NP_598758 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)