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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPL46, mitochondrial ribosomal protein L46
Sequence ID:NM_022163
Entrez Gene ID:26589
Ensembl ID:ENSG00000259494

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 89002708 - 89010610

NM_022163 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
214068900270889003093
4075808900793389008106
5817678900881789009003
76810208901038089010632

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4293733Full LengthBC017883mitochondrial ribosomal protein L46

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022163 NP_071446 Q9H2W6  

Related Sequences

 
mRNAGenPeptSwissProt
AF205435 AAG33698 Q9H2W6
AF210056 AAG43507 Q9H2W6
BC017883 AAH17883 Q9H2W6
HQ447623 ADQ32109  
AK074053 BAB84879 Q8TER9
AK315434 BAG37822 Q9H2W6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL46 NP_071446 M.musculus Mrpl46 67308 Gene Info NP_075820 82
R.norvegicus Mrpl46 293054   NP_001013086 82
A.gambiae AgaP_AGAP006684 1277274   XP_316723 40
D.melanogaster mRpL46 38230   NP_647661 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)