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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H2AI, histone cluster 1, H2ai
Sequence ID:NM_003509
Entrez Gene ID:8329
Ensembl ID:ENSG00000196747

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 27775950 - 27776380

NM_003509 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14682777597627776443

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8144132Full LengthBC105129histone cluster 1, H2ai
8327722Full LengthBC112254histone cluster 1, H2ai
8327724Full LengthBC112256histone cluster 1, H2ai
5314244IncompleteBC067782histone cluster 1, H2ai

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003500  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003509 NP_003500 P0C0S8 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC112254 AAI12255 P0C0S8
BC112256 AAI12257 P0C0S8
EU446965 ABZ92494  
AK311766 BAG34709 A4FTV9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H2AI NP_003500 H.sapiens HIST1H2AG 8969 Gene Info NP_066408 100
H.sapiens HIST1H2AK 8330 Gene Info NP_003501 100
H.sapiens HIST1H2AL 8332 Gene Info NP_003502 100
H.sapiens HIST1H2AM 8336 Gene Info NP_003505 100
R.norvegicus LOC680322 680322   XP_001056658 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)