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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TXNIP, thioredoxin interacting protein
Sequence ID:NM_006472
Entrez Gene ID:10628
Ensembl ID:ENSG00000117289

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 145438525 - 145441739

NM_006472 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1591145438461145439051
592664145439592145439664
665812145439777145439924
813915145440037145440139
9161172145440268145440524
11731329145440631145440787
13301481145440901145441052
14822925145441182145442625

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939547Full LengthBC093702thioredoxin interacting protein
7939549Full LengthBC093704thioredoxin interacting protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006463  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006472 NP_006463 Q9H3M7 Arrestin_N
Arrestin_C

Related Sequences

 
mRNAGenPeptSwissProt
S73591 AAB31977 Q9H3M7
BC093702 AAH93702 Q9H3M7
BC093704 AAH93704 Q9H3M7
AY594328 AAT01927 Q9H3M7
AK301148 BAG62739 B4DVM7
AK301203 BAG62780 B4DVR8
AK304670 BAG65445 B4E3D3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TXNIP NP_006463 R.norvegicus Txnip 117514   NP_001008767 97
M.musculus Txnip 56338 Gene Info NP_001009935 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)