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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLDN6, claudin 6
Sequence ID:NM_021195
Entrez Gene ID:9074
Ensembl ID:ENSG00000184697

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 3065359 - 3066022

NM_021195 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
21135030647133066042
1351138930681493068187

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2963008Full LengthBC008934claudin 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067018  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021195 NP_067018 P56747 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
BC008934 AAH08934 P56747
AF125306 AAK02013 P56747
BT007399 AAP36063 P56747
AY358480 AAQ88844 P56747
AK075329 BAG52111 P56747

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLDN6 NP_067018 M.musculus Cldn6 54419 Gene Info NP_061247 88
R.norvegicus Cldn6 287098   NP_001095834 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)