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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRNAU1AP, tRNA selenocysteine 1 associated protein 1
Sequence ID:NM_017846
NR_003109
Entrez Gene ID:54952
Ensembl ID:ENSG00000180098

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 28880183 - 28892014

NM_017846 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11212887952828879648
1222192888015128880248
2203192888714428887243
3203722888785728887909
3735042889121428891345
5056242889380528893924
6257872889768728897849
7888212889837828898411
82218662890401128905055

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3349210Full LengthBC000680tRNA selenocysteine 1 associated protein 1
5769935Full LengthBC039879tRNA selenocysteine 1 associated protein 1
5769975IncompleteBC035855tRNA selenocysteine associated protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060316  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017846 NP_060316 Q9NX07 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF118082 AAF22026 Q9UHT1
BC000680 AAH00680 Q9NX07
BC039879 AAH39879 Q9NX07
AK000510 BAA91217 Q9NX07
AK300162 BAH13226 B7Z6E0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRNAU1AP NP_060316 M.musculus Trnau1ap 71787 Gene Info NP_082201 99
D.melanogaster CG15440 33652   NP_608837 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)