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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPRC1, Peroxisome proliferator-activated receptor gamma, coactivator-related 1
Sequence ID:NM_015062
Entrez Gene ID:23082
Ensembl ID:ENSG00000148840

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 103892818 - 103910081

 Exon Info From UCSC:
NM_015062

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6514597Full LengthBC063806peroxisome proliferator-activated receptor gamma, coactivator-related 1
6526680Full LengthBC063829peroxisome proliferator-activated receptor gamma, coactivator-related 1
3138538IncompleteBC002561peroxisome proliferator-activated receptor gamma, coactivator-related 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055877  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015062 NP_055877 Q5VV67 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC002561 AAH02561 Q5VV67
BC063806 AAH63806 Q5VV67
BC063829 AAH63829 Q5VV67
AF325193 AAK11573 Q5VV67
AB011167 BAA25521 Q5VV67
AK299885 BAG61732 B4DSS0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPRC1 NP_055877 M.musculus Pprc1 226169 Gene Info NP_001074683 78
R.norvegicus Pprc1 294007   NP_001099833 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)