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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASMTL, acetylserotonin O-methyltransferase-like
Sequence ID:NM_001173473
NM_001173474
NM_004192
RefSeqGene ID:NG_016772
Entrez Gene ID:8623
Ensembl ID:ENSG00000169093

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.3; Yp11.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 1522033 - 1571766

 Exon Info From UCSC:
NM_001173473
NM_001173474
NM_004192

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988425Full LengthBC010089acetylserotonin O-methyltransferase-like
3051194Full LengthBC002508acetylserotonin O-methyltransferase-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004183  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001173473 NP_001166944    
NM_001173474 NP_001166945    
NM_004192 NP_004183 O95671 Methyltransf_2
Maf

Related Sequences

 
mRNAGenPeptSwissProt
BC002508 AAH02508 O95671
BC010089 AAH10089 O95671
JF432527 ADZ15744  
AK090498 BAC03468 O95671
AK001090 BAG50855 B3KM43
AK297805 BAG60143 B4DN81
AK299231 BAG61263 B4DRF1
AK301844 BAG63287 B4DX75

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASMTL NP_004183 A.gambiae AgaP_AGAP008707 1275556   XP_314812 46
N.crassa NCU03130 3881122   XP_964989 43
S.pombe SPAC3G6.03c 2543209   NP_594969 42
C.elegans dod-18 183813   NP_492205 38
S.cerevisiae YOR111W 854278   NP_014754 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)