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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LYPLA2, Lysophospholipase II
Sequence ID:NM_007260
Entrez Gene ID:11313
Ensembl ID:ENSG00000011009

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 24118481 - 24121774

NM_007260 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1952411764524117739
961992411914624119249
2002312411949724119528
2322972411964024119705
2983452412019424120241
3464162412034924120419
4174902412055224120625
4915922412071324120814
5937662412091624121089
76716222412117124122026

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138786Full LengthBC017193lysophospholipase II
3845764Full LengthBC017034lysophospholipase II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009191  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007260 NP_009191 O95372 Abhydrolase_2

Related Sequences

 
mRNAGenPeptSwissProt
AF098668 AAC72844 O95372
BC017034 AAH17034 O95372
BC017193 AAH17193 O95372
AF090423 AAP97210 O95372
DQ896824 ABM87823  
EU176281 ABW03732  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LYPLA2 NP_009191 M.musculus Lypla2 26394 Gene Info NP_036072 99
R.norvegicus Lypla2 83510   NP_112632 99
D.melanogaster CG18815 59176   NP_996056 55
A.gambiae AgaP_AGAP012126 1280553   XP_320405 50
N.crassa NCU02027 3880814   XP_964649 47
S.pombe SPAC8E11.04c 2542889   NP_594165 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)