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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TCEB1, transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
Sequence ID:NM_001204857
NM_001204858
NM_001204859
NM_001204860
NM_001204861
NM_001204862
NM_001204863
NM_001204864
NM_005648
Entrez Gene ID:6921
Ensembl ID:ENSG00000154582

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 74858633 - 74884346

Transcript StartTranscript EndChromosomal Start Chromosomal End
144357485863374859054
4365797486814574868288
5806337487199974872052
6346687488431174884345

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3923736Full LengthBC013809transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
6061521Full LengthBC100283transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
6062030Full LengthBC100028transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
30411791Full LengthBC093065transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204857 NP_001191786    
NM_001204858 NP_001191787    
NM_001204859 NP_001191788    
NM_001204860 NP_001191789    
NM_001204861 NP_001191790    
NM_001204862 NP_001191791    
NM_001204863 NP_001191792    
NM_001204864 NP_001191793    
NM_005648 NP_005639 Q15369 Skp1_POZ

Related Sequences

 
mRNAGenPeptSwissProt
L34587 AAA67650 Q15369
BC013809 AAH13809 Q15369
BC093065 AAH93065 Q15369
BC100028 AAI00029 Q15369
BC100283 AAI00284 Q15369
DQ894197 ABM85123  
EU176247 ABW03698  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TCEB1 NP_001191786 M.musculus Tceb1 67923 Gene Info NP_080732 100
R.norvegicus Tceb1 64525   NP_072115 100
A.gambiae AgaP_AGAP011535 1271221   XP_309973 95
D.melanogaster Elongin-C 37237   NP_725894 94
C.elegans elc-1 190775   NP_497405 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)