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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXA4, homeobox A4
Sequence ID:NM_002141
Entrez Gene ID:3201
Ensembl ID:ENSG00000197576

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27168251 - 27170399

NM_002141 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
210652716812627169189
106617282716973627170398

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063972Full LengthBC160036homeobox A4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002132  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002141 NP_002132 Q00056 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
M74297 AAA58664 Q00056
BC126994 AAI26995 A1L0T6
BC160036 AAI60036  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXA4 NP_002132 M.musculus Hoxa4 15401 Gene Info NP_032291 80
R.norvegicus LOC100360577 100360577   XP_002729358 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)