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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPP2R5D, protein phosphatase 2, regulatory subunit B', delta
Sequence ID:NM_001270476
NM_006245
NM_180976
NM_180977
Entrez Gene ID:5528
Ensembl ID:ENSG00000112640

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 42952401 - 42979418

 Exon Info From UCSC:
NM_006245
NM_180976
NM_180977

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3355395Full LengthBC001175protein phosphatase 2, regulatory subunit B', delta isoform
3507280Full LengthBC001095protein phosphatase 2, regulatory subunit B', delta isoform
3853892Full LengthBC010692protein phosphatase 2, regulatory subunit B', delta isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_851307  NP_851308  NP_006236  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270476 NP_001257405    
NM_006245 NP_006236 Q14738 B56
NM_180976 NP_851307   B56
NM_180977 NP_851308   B56

Related Sequences

 
mRNAGenPeptSwissProt
L76702 AAB69751 Q14738
BC001095 AAH01095 Q14738
BC001175 AAH01175 Q14738
BC010692 AAH10692 Q14738
EU446999 ABZ92528  
D78360 BAA11372 Q14738
AB000634 BAA20381 Q14738
AB000635 BAA20382 Q14738
AB209861 BAD93098 Q59EF0
AK290604 BAF83293 Q14738
AK291797 BAF84486 A8K6Y2
AK299696 BAG61599 B4DSD7
AB451342 BAG70156 Q14738
AB451357 BAG70171 Q14738

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPP2R5D NP_006236 R.norvegicus Ppp2r5d 363193   XP_001062510 99
M.musculus Ppp2r5d 21770 Gene Info NP_033384 97
D.melanogaster PP2A-B' 42169   NP_001138071 71
C.elegans pptr-2 179526   NP_001122845 64
A.thaliana ATB' DELTA 822200   NP_189232 52
S.pombe par2 2542891   NP_593298 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)