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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H1T, histone cluster 1, H1t
Sequence ID:NM_005323
Entrez Gene ID:3010
Ensembl ID:ENSG00000187475

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26107646 - 26108364

NM_005323 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
27252610764026108363

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262183Full LengthBC069517histone cluster 1, H1t
40146381Full LengthBC130350histone cluster 1, H1t

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005314  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005323 NP_005314 P22492 Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
BC069517 AAH69517 P22492
BC130350 AAI30351 A1L407
EU446962 ABZ92491  
HQ258096 ADR82850  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H1T NP_005314 R.norvegicus Hist1h1t 24438   NP_036711 66
M.musculus Hist1h1t 107970 Gene Info NP_034507 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)