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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPLD1, glycosylphosphatidylinositol specific phospholipase D1
Sequence ID:NM_001503
NM_177483
RefSeqGene ID:NG_029888
Entrez Gene ID:2822
Ensembl ID:ENSG00000112293

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 24429061 - 24489850

 Exon Info From UCSC:
NM_001503
NM_177483

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063355Full LengthBC157056glycosylphosphatidylinositol specific phospholipase D1
3354070IncompleteBC007614glycosylphosphatidylinositol specific phospholipase D1
100061719BC156271glycosylphosphatidylinositol specific phospholipase D1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001494  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001503 NP_001494 P80108 EC 3.1.4.50 FG-GAP

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L11701 AAA36444 P80108 EC 3.1.4.50
L11702 AAA36445 P80108 EC 3.1.4.50
AY007546 AAG16627 P80108 EC 3.1.4.50
BC007614 AAH07614 P80108 EC 3.1.4.50
BC020748 AAH20748 P80108 EC 3.1.4.50
BC093645 AAH93645 P80108 EC 3.1.4.50
BC112001 AAI12002 P80108 EC 3.1.4.50
BC156271 AAI56272    
BC157056 AAI57057 P80108 EC 3.1.4.50
AJ308108 CAC87068 P80108 EC 3.1.4.50

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPLD1 NP_001494 R.norvegicus Gpld1 291132   NP_001093982 80
M.musculus Gpld1 14756 Gene Info NP_032182 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta