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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WDR36, WD repeat domain 36
Sequence ID:NM_139281
RefSeqGene ID:NG_008979
Entrez Gene ID:134430
Ensembl ID:ENSG00000134987

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
GLAUCOMA 1, OPEN ANGLE, ECYP1B1
OPTN

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 110427869 - 110462657

 Exon Info From UCSC:
NM_139281

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020507Full LengthBC136517WD repeat domain 36
40147047Full LengthBC133025WD repeat domain 36

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_644810  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139281 NP_644810 Q8NI36 WD40
Utp21

Related Sequences

 
mRNAGenPeptSwissProt
BC133025 AAI33026 Q8NI36
BC136517 AAI36518 Q8NI36
AF385437 AAM43838 Q8NI36
AK095312 BAC04527 Q8NI36
CR749211 CAH18068 Q68E02

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDR36 NP_644810 M.musculus Wdr36 225348 Gene Info NP_001103485 89
R.norvegicus LOC688637 688637   XP_001067706 89
A.gambiae AgaP_AGAP004557 1274698   XP_313855 44
D.melanogaster CG9799 41647   NP_650284 40
A.thaliana AT4G04940 825833   NP_567275 40
S.pombe SPCC1672.07 2539299   NP_587878 38
N.crassa NCU07011 3877980   XP_961832 35
S.cerevisiae UTP21 851125   NP_013513 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)