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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TOMM20, translocase of outer mitochondrial membrane 20 homolog (yeast)
Sequence ID:NM_014765
Entrez Gene ID:9804
Ensembl ID:ENSG00000173726

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 235291117 - 235291252

NM_014765 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
252788235272659235275422
27892931235277082235277224
29323013235283132235283213
30143060235285640235285686
30613407235291909235292255

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3462090Full LengthBC000882translocase of outer mitochondrial membrane 20 homolog (yeast)
4818590Full LengthBC066335translocase of outer mitochondrial membrane 20 homolog (yeast)
5579754Full LengthBC107851translocase of outer mitochondrial membrane 20 homolog (yeast)
6082526Full LengthBC071994translocase of outer mitochondrial membrane 20 homolog (yeast)
6157036Full LengthBC100286translocase of outer mitochondrial membrane 20 homolog (yeast)
4025033IncompleteBC009886translocase of outer mitochondrial membrane 20 homolog (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055580  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014765 NP_055580 Q15388 MAS20

Related Sequences

 
mRNAGenPeptSwissProt
BC000882 AAH00882 Q15388
BC066335 AAH66335 Q15388
BC071994 AAH71994 Q15388
BC100286 AAI00287 Q15388
BC107851 AAI07852 Q15388
DQ891102 ABM82028  
EU176557 ABW03358  
D13641 BAA02804 Q15388
AK289810 BAF82499 Q15388
CR456718 CAG32999 Q15388

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TOMM20 NP_055580 M.musculus Tomm20 67952 Gene Info NP_077176 99
R.norvegicus Tomm20 266601   NP_690918 98
A.gambiae AgaP_AGAP012339 1280364   XP_320211 59
D.melanogaster Tom20 40189   NP_649169 59
C.elegans F23H12.2 179691   NP_506092 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)