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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARL13B, ADP-ribosylation factor-like 13B
Sequence ID:NM_001174150
NM_001174151
NM_144996
NM_182896
NR_033427
RefSeqGene ID:NG_017076
Entrez Gene ID:200894
Ensembl ID:ENSG00000169379

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
JOUBERT SYNDROME 8 

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q11.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 93699005 - 93772287

 Exon Info From UCSC:
NM_001174150
NM_001174151
NM_144996
NM_182896

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4818884Full LengthBC094725ADP-ribosylation factor-like 13B
40026398Full LengthBC104035ADP-ribosylation factor-like 13B
40026399Full LengthBC104036ADP-ribosylation factor-like 13B
4421648IncompleteBC015439ADP-ribosylation factor-like 13B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659433  NP_878899  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001174150 NP_001167621    
NM_001174151 NP_001167622    
NM_144996 NP_659433   Arf
NM_182896 NP_878899 Q3SXY8 Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC094725 AAH94725 Q3SXY8
BC104035 AAI04036 Q3SXY8
BC104036 AAI04037 Q3SXY8
EU832241 ACE86811  
EU832148 ACE87498  
EU832840 ACE87851  
GQ129241 ACT64375  
AK296994 BAG59533 B4DLH1
AK299284 BAG61300 B4DRI8
AL713789 CAD28544 Q8TCL5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARL13B NP_001167621 M.musculus Arl13b 68146 Gene Info NP_080853 82
R.norvegicus Arl13b 304037   NP_001100571 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)