Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDLIM7, PDZ and LIM domain 7 (enigma)
Sequence ID:NM_005451
NM_203352
NM_213636
NM_203353
Entrez Gene ID:9260
Ensembl ID:ENSG00000196923

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 176910396 - 176924584

 Exon Info From UCSC:
NM_005451
NM_203352
NM_213636

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506748Full LengthBC001093PDZ and LIM domain 7 (enigma)
6729368Full LengthBC084575PDZ and LIM domain 7 (enigma)
5287820IncompleteBC067806PDZ and LIM domain 7 (enigma)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005442  NP_998801  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005451 NP_005442 Q9NR12 LIM
PDZ
NM_203352 NP_976227    
NM_213636 NP_998801   PDZ

Related Sequences

 
mRNAGenPeptSwissProt
AF265209 AAF76152 Q9NR12
BC001093 AAH01093 Q9NR12
BC014521 AAH14521 Q9NR12
BC084575 AAH84575 Q9NR12
AF345904 AAK30567 Q9NR12
AF345905 AAK30568 Q9NR12
AF345906 AAK30569 Q9NR12
DQ892135 ABM83061  
DQ895329 ABM86255  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDLIM7 NP_005442 R.norvegicus Pdlim7 286908   NP_775148 95
M.musculus Pdlim7 67399 Gene Info NP_001107560 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)