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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OR1A1, olfactory receptor, family 1, subfamily A, member 1
Sequence ID:NM_014565
Entrez Gene ID:8383
Ensembl ID:ENSG00000172146

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 3118914 - 3119843

NM_014565 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
192831189143119841

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7216916Full LengthBC069169olfactory receptor, family 1, subfamily A, member 1
40114773Full LengthBC141934olfactory receptor, family 1, subfamily A, member 1
40114774Full LengthBC141935olfactory receptor, family 1, subfamily A, member 1
40114771IncompleteBC128248olfactory receptor, family 1, subfamily A, member 1
40114772IncompleteBC128249olfactory receptor, family 1, subfamily A, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055380  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014565 NP_055380 Q9P1Q5 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC069169 AAH69169 Q9P1Q5
BC128248 AAI28249 Q9P1Q5
BC141934 AAI41935 Q9P1Q5
BC141935 AAI41936 Q9P1Q5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OR1A1 NP_055380 M.musculus Olfr403 404316 Gene Info NP_997505 84
M.musculus Olfr43 258706 Gene Info NP_666922 84
R.norvegicus Olr1513 287513   NP_001000035 82
R.norvegicus Olr1514 287514   NP_001000036 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)