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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATOH1, atonal homolog 1 (Drosophila)
Sequence ID:NM_005172
Entrez Gene ID:474
Ensembl ID:ENSG00000172238

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 94750076 - 94751142

NM_005172 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110659475007794751141

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7217005Full LengthBC069145atonal homolog 1 (Drosophila)
7262394Full LengthBC069594atonal homolog 1 (Drosophila)
7262406Full LengthBC069604atonal homolog 1 (Drosophila)
8322675Full LengthBC113623atonal homolog 1 (Drosophila)
8322677Full LengthBC113625atonal homolog 1 (Drosophila)
7262382IncompleteBC069578atonal homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005163  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005172 NP_005163 Q92858 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC069145 AAH69145 Q92858
BC069578 AAH69578 Q6ISE7
BC069594 AAH69594 Q92858
BC069604 AAH69604 Q92858
BC113623 AAI13624 Q92858
BC113625 AAI13626 Q92858
EU446465 ABZ91994  
HQ258191 ADR82945  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATOH1 NP_005163 M.musculus Atoh1 11921 Gene Info NP_031526 89
R.norvegicus Atoh1 500156   NP_001102708 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)