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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFI27, interferon, alpha-inducible protein 27
Sequence ID:NM_005532
NM_001130080
Entrez Gene ID:3429
Ensembl ID:ENSG00000165949

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 94577082 - 94582176

 Exon Info From UCSC:
NM_005532
NM_001130080

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3915505Full LengthBC015492interferon, alpha-inducible protein 27

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005523  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130080 NP_001123552    
NM_005532 NP_005523 P40305 Ifi-6-16

Related Sequences

 
mRNAGenPeptSwissProt
BC015492 AAH15492 P40305
AY126456 AAM95743 Q7Z5R2
AY126457 AAM95744 Q7Z5R1
AY126458 AAM95745 Q7Z5R0
BT006781 AAP35427 P40305
DQ893816 ABM84742  
AK289535 BAF82224 A8K0H0
AK312089 BAG35025 A8K0H0
X67325 CAA47739 P40305
AJ294851 CAC10503 Q9H4B1
BN000227 CAE00394 P40305
AM393107 CAL37985 P40305
AM393779 CAL38654  

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)