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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRTAP5-3, Keratin associated protein 5-3
Sequence ID:NM_001012708
Entrez Gene ID:387266
Ensembl ID:ENSG00000196224

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 1628794 - 1629693

NM_001012708 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
189916287941629692

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015770Full LengthBC148733keratin associated protein 5-3
100015313BC148332keratin associated protein 5-3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012708 NP_001012726 Q6L8H2  

Related Sequences

 
mRNAGenPeptSwissProt
BC148332 AAI48333  
BC148733 AAI48734 Q6L8H2
AY597812 AAT09005 Q6L8H2
AB126072 BAD20199 Q6L8H2
AJ628246 CAF31638 Q6L8H2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRTAP5-3 NP_001012726 R.norvegicus LOC685544 685544   NP_001102944 76
R.norvegicus Krtap5-5 685436   XP_001063784 76
R.norvegicus LOC685392 685392   XP_001063606 74
R.norvegicus LOC100360953 100360953   XP_002728868 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)