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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PDCD1LG2, programmed cell death 1 ligand 2
Sequence ID:NM_025239
Entrez Gene ID:80380
Ensembl ID:ENSG00000197646

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 5510569 - 5570398

NM_025239 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125955105445510802
26032855225325522600
32963455347445535049
63590455493345549603
905103955576175557751
1040108955631615563210
1090241755699535571280

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322730Full LengthBC113678programmed cell death 1 ligand 2
8322732Full LengthBC113680programmed cell death 1 ligand 2
30915184Full LengthBC074766programmed cell death 1 ligand 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025239 NP_079515 Q9BQ51  

Related Sequences

 
mRNAGenPeptSwissProt
BC074766 AAH74766 Q9BQ51
BC113678 AAI13679 Q9BQ51
BC113680 AAI13681 Q9BQ51
AF344424 AAK15370 Q9BQ51
AF329193 AAK31105 Q9BQ51
AY254343 AAP13471 Q9BQ51
AY271901 AAP49000 Q9BQ51
AY271902 AAP49001 Q9BQ51
DQ336699 ABC59616 Q2LC89
EF444806 ABO33153 A4GW21
HQ258142 ADR82896  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDCD1LG2 NP_079515 M.musculus Pdcd1lg2 58205 Gene Info NP_067371 70
R.norvegicus Pdcd1lg2 309304   NP_001101052 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)