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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H3D, histone cluster 1, H3d
Sequence ID:NM_003530
Entrez Gene ID:8351
Ensembl ID:ENSG00000197409

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26197067 - 26199521

NM_003530 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
24862619701226197496
4878642619908626199463

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3608479Full LengthBC031333histone cluster 1, H3d

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003521  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003530 NP_003521 P68431 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC031333 AAH31333 P68431
DQ892795 ABM83721  
DQ896042 ABM87041  
AK316611 BAG38198 P68431

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H3D NP_003521 H.sapiens HIST1H3E 8353 Gene Info NP_003523 100
H.sapiens HIST1H3F 8968 Gene Info NP_066298 100
H.sapiens HIST1H3A 8350 Gene Info NP_003520 100
H.sapiens HIST1H3J 8356 Gene Info NP_003526 100
H.sapiens HIST1H3H 8357 Gene Info NP_003527 100
H.sapiens HIST1H3G 8355 Gene Info NP_003525 100
H.sapiens HIST1H3B 8358 Gene Info NP_003528 100
H.sapiens HIST1H3C 8352 Gene Info NP_003522 100
H.sapiens HIST1H3I 8354 Gene Info NP_003524 100
M.musculus Hist1h3i 319153 Gene Info NP_835514 100
M.musculus Hist1h3h 319152 Gene Info NP_835513 100
M.musculus Hist1h3a 360198 Gene Info NP_038578 100
M.musculus Hist1h3g 97908 Gene Info NP_659539 100
R.norvegicus LOC679994 679994   XP_001055231 100
R.norvegicus LOC680511 680511   XP_001057500 100
A.thaliana AT4G40040 830165   NP_849529 96
A.thaliana AT4G40030 830164   NP_001078516 96
A.thaliana AT5G10980 830965   NP_196659 96
P.falciparum PFF0510w 3885920   XP_966093 93
P.falciparum PFF0865w 3885798   XP_966164 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)