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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRIT1, KRIT1, ankyrin repeat containing
Sequence ID:NM_001013406
NM_004912
NM_194454
NM_194455
NM_194456
RefSeqGene ID:NG_012964
Entrez Gene ID:889
Ensembl ID:ENSG00000001631

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CAVERNOUS MALFORMATIONS OF CNS AND RETINA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 91829684 - 91875109

 Exon Info From UCSC:
NM_001013406
NM_004912
NM_194454
NM_194455
NM_194456

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5922988Full LengthBC098442KRIT1, ankyrin repeat containing
6174749Full LengthBC094684KRIT1, ankyrin repeat containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_919436  NP_919438  NP_919437  NP_004903  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001013406 NP_001013424    
NM_004912 NP_004903 O00522 Ank
NM_194454 NP_919436 O00522 Ank
NM_194455 NP_919437 O00522 Ank
NM_194456 NP_919438 O00522 Ank

Related Sequences

 
mRNAGenPeptSwissProt
U90268 AAB58582 O00522
AF296765 AAG10220 O00522
AF310133 AAG47774 O00522
BC094684 AAH94684 O00522
AF388384 AAM19465 O00522
AY380057 AAQ94072 O00522
AY380058 AAQ94073  
AY380059 AAQ94074  
AY380060 AAQ94075  
AY993944 AAY25567  
AK055305 BAG51497 O00522
AK056537 BAG51741 A4D1F7
AJ294850 CAC17608 O00522

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRIT1 NP_004903 M.musculus Krit1 79264 Gene Info NP_109600 95
R.norvegicus Krit1 362317   NP_001102088 95
C.elegans kri-1 191275   NP_001021863 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)