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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SCAP, SREBF chaperone
Sequence ID:NM_012235
Entrez Gene ID:22937
Ensembl ID:ENSG00000114650

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 47455202 - 47484520

 Exon Info From UCSC:
NM_012235

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3852258Full LengthBC020987SREBF chaperone

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036367  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012235 NP_036367 Q12770 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC020987 AAH20987 Q12770
BC027207 AAH27207 Q6PIX8
D83782 BAA12111 Q12770
AK027402 BAB55088 Q12770
AK075528 BAC11673 Q12770
AK291484 BAF84173 A8K619
AK300311 BAH13256 B7Z6H0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SCAP NP_036367 R.norvegicus Scap 301024   NP_001094436 93
M.musculus Scap 235623 Gene Info NP_001001144 92
A.gambiae AgaP_AGAP011336 1270602   XP_309314 38
D.melanogaster SCAP 35529   NP_788277 37
C.elegans scp-1 174479   NP_001022051 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta