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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SCAP, SREBF chaperone
Sequence ID:NM_012235
Entrez Gene ID:22937
Ensembl ID:ENSG00000114650

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 47455202 - 47484520

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3852258Full LengthBC020987SREBF chaperone

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036367  

Protein Infomation

NM_012235 NP_036367 Q12770 WD40

Related Sequences

BC020987 AAH20987 Q12770
BC027207 AAH27207 Q6PIX8
D83782 BAA12111 Q12770
AK027402 BAB55088 Q12770
AK075528 BAC11673 Q12770
AK291484 BAF84173 A8K619
AK300311 BAH13256 B7Z6H0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SCAP NP_036367 R.norvegicus Scap 301024   NP_001094436 93
M.musculus Scap 235623 Gene Info NP_001001144 92
A.gambiae AgaP_AGAP011336 1270602   XP_309314 38
D.melanogaster SCAP 35529   NP_788277 37
C.elegans scp-1 174479   NP_001022051 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta