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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RNFT1, Ring finger protein, transmembrane 1
Sequence ID:NM_016125
Entrez Gene ID:51136
Ensembl ID:ENSG00000189050

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 58029723 - 58039964

NM_016125 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
177655802972358030471
7668675803140558031506
8689335803384858033913
93410925803458458034742
109312465803565158035804
124713475803742858037528
134814245803990058039976
142518825804018758040644
188320315804196858042116

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30390062Full LengthBC088365ring finger protein, transmembrane 1
3930310IncompleteBC006971ring finger protein, transmembrane 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016125 NP_057209 Q5M7Z0  

Related Sequences

 
mRNAGenPeptSwissProt
AF100745 AAD43009 Q5M7Z0
BC088365 AAH88365 Q5M7Z0
AK098649 BAC05364 Q5M7Z0
AK294806 BAG57925 B4DGW4
AK295162 BAG58176 B4DHL4
AK296197 BAG58926 B4DJR4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNFT1 NP_057209 M.musculus Rnft1 76892 Gene Info NP_084064 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)