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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SP3, Sp3 transcription factor
Sequence ID:NM_001017371
NM_001172712
NM_003111
RefSeqGene ID:NG_029153
Entrez Gene ID:6670
Ensembl ID:ENSG00000172845

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone marrow, brain, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 174771187 - 174820883

 Exon Info From UCSC:
NM_001017371
NM_001172712
NM_003111

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992130Full LengthBC126414Sp3 transcription factor
9052446Full LengthBC143928Sp3 transcription factor
4797286IncompleteBC042945Sp3 transcription factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003102  NP_001017371  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001017371 NP_001017371   zf-C2H2
NM_001172712 NP_001166183    
NM_003111 NP_003102 Q02447 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
M97191 AAA36630 Q02447
BC042945 AAH42945 Q86TP0
BC126414 AAI26415 Q02447
BC143928 AAI43929 B7ZLN9
AY070137 AAL58086 Q02447
AY070137 AAL58087 Q8WWU3
AY070137 AAL58088 Q8WWU2
AY441957 AAR30505 Q02447
AY441958 AAR30506 Q02447
HQ258632 ADR83384  
AB209334 BAD92571 Q59FX5
AK304199 BAG65079 Q02447
X68560 CAA48562 Q02447
AJ310752 CAC34575 Q02447
CR749323 CAH18178 Q68DP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SP3 NP_003102 M.musculus Sp3 20687 Gene Info NP_001018052 97
R.norvegicus Sp3 367846   XP_002729217 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta