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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CBWD1, COBW domain containing 1
Sequence ID:NM_001145355
NM_001145356
NM_018491
Entrez Gene ID:55871
Ensembl ID:ENSG00000172785

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 121408 - 179018

 Exon Info From UCSC:
NM_001145355
NM_001145356
NM_018491

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4069589Full LengthBC005996COBW domain containing 1
4133536Full LengthBC009573COBW domain containing 1
4133722Full LengthBC013432COBW domain containing 1
40146781Full LengthBC132759COBW domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060961  NP_742000  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145355 NP_001138827    
NM_001145356 NP_001138828    
NM_018491 NP_060961 Q9BRT8 cobW
CobW_C
NM_172003 NP_742000 Q8IUF1 cobW
CobW_C

Related Sequences

 
mRNAGenPeptSwissProt
AF257330 AAF68990 Q9BRT8
BC005996 AAH05996 Q9BRT8
BC009573 AAH09573 Q9BRT8
BC013432 AAH13432 Q9BRT8
BC120991 AAI20992 Q8IUF1
BC120992 AAI20993 Q8IUF1
BC132759 AAI32760 Q9BRT8
AF212253 AAK14935 Q9BRT8
AF452722 AAN64907 Q8IUF1
AY320414 AAP73813 Q9BRT8
AY343910 AAQ76868 Q8IUF1
AY343911 AAQ76869 Q9BRT8
HQ447613 ADQ32099  
HQ258394 ADR83148  
JF432127 ADZ15344  
AK124867 BAC85973 Q6ZV90
AK290072 BAF82761 Q8IUF1
AK290648 BAF83337 Q9BRT8
AK315855 BAF98746 Q9BRT8
AK297292 BAH12539 B7Z4F3
AK303653 BAH14006 B7Z8M0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBWD1 NP_060961 M.musculus Cbwd1 226043 Gene Info NP_666209 82
R.norvegicus Cbwd1 171057   NP_598219 80
N.crassa NCU11371 5847191   XP_001728089 47
A.thaliana AT1G26520 839192   NP_173974 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)