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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HELT, helt bHLH transcription factor
Sequence ID:NM_001029887
Entrez Gene ID:391723
Ensembl ID:ENSG00000187821

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 185939994 - 185941958

NM_001029887 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1159185940082185940240
160264185940540185940644
265484185940777185940996
485983185941426185941924

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021663Full LengthBC140795HES/HEY-like transcription factor
9053095Full LengthBC144567HES/HEY-like transcription factor
9053097Full LengthBC144569HES/HEY-like transcription factor
100064168Full LengthBC160136HES/HEY-like transcription factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001025058  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001029887 NP_001025058 A6NFD8 HLH
Hairy_orange

Related Sequences

 
mRNAGenPeptSwissProt
BC140795 AAI40796 A6NFD8
BC144567 AAI44568 B7ZMI7
BC144569 AAI44570 A6NFD8
BC160136 AAI60136 A6NFD8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HELT NP_001025058 M.musculus Helt 234219 Gene Info NP_776150 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)