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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLEC9A, C-type lectin domain family 9, member A
Sequence ID:NM_207345
Entrez Gene ID:283420
Ensembl ID:ENSG00000197992

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 10183276 - 10205434

NM_207345 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12961018327510183570
2974511019406410194218
4525551020458910204692
5567041020522810205376
7057851020686910206949
7869321021372510213871
93310841021565310215804
108512061021733010217451
120716721021809810218563

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997228  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_207345 NP_997228 Q6UXN8 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
AY358265 AAQ88632 Q6UXN8
EU339276 ABZ04557 Q6UXN8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLEC9A NP_997228 M.musculus Clec9a 232414 Gene Info NP_766320 60
R.norvegicus Clec9a 502901   NP_001102824 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)