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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SARS, Seryl-tRNA synthetase
Sequence ID:NM_006513
Entrez Gene ID:6301
Ensembl ID:ENSG00000031698

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 109757881 - 109760111

 Exon Info From UCSC:
NM_006513

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3505218Full LengthBC000716seryl-tRNA synthetase
4129592Full LengthBC009390seryl-tRNA synthetase
4133889Full LengthBC111398seryl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006504  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006513 NP_006504 P49591 EC 6.1.1.11 tRNA-synt_2b
Seryl_tRNA_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC000716 AAH00716 P49591 EC 6.1.1.11
BC009390 AAH09390 P49591 EC 6.1.1.11
BC111398 AAI11399 Q0VGA5  
DQ892144 ABM83070    
DQ895339 ABM86265    
D49914 BAA95602 P49591 EC 6.1.1.11
AK222677 BAD96397 Q53HA4  
AK312771 BAG35636 P49591 EC 6.1.1.11
X91257 CAA62635 P49591 EC 6.1.1.11

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SARS NP_006504 M.musculus Sars 20226 Gene Info NP_035449 96
R.norvegicus Sars 266975   NP_001007607 96
A.gambiae AgaP_AGAP008265 1277721   XP_317207 70
D.melanogaster CG17259 33518   NP_608743 70
C.elegans srs-2 177859   NP_501804 66
S.pombe SPAC29A4.15 2542163   NP_594867 55
A.thaliana AT5G27470 832806   NP_198099 53
S.cerevisiae SES1 851587   NP_010306 52
N.crassa NCU01443 3872116   XP_955965 52
P.falciparum PF07_0073 2655117   XP_001349080 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)